Publications (aquaculture & fisheries, 1990 and later)
2007. Moss, D.R., Arce, S.M., Otoshi, C.A., Doyle, R.W., Moss, S.M. Effects of inbreeding on survival and growth of Pacific White Shrimp Penaeus (Litopenaeus) vannamei. Aquaculture
272 (S1):30-37.
2007. Live gene banking of endangered populations of
Atlantic
salmon. 2007. O'Reilly, P. T. and R. W. Doyle in E.
Verspoor, L. Stradmeyer, and J. Nielsen, eds. The Atlantic Salmon:
Genetics, Conservation and Management. London, Blackwell. pp 425-469
2006. Doyle, R.W., Moss, D.R., Moss, S.M. Shrimp
copyright: inbreeding strategies effective against
illegal copying of genetically improved shrimp. Global
Aquaculture Advocate, April/May 2006, 76-79.
2005.
Basiao, Z. U., A. L. Arago, and R. W. Doyle. A farmer-oriented
Nile
tilapia (Oreochromis niloticus)
breed improvement program in the
Philippines. Aquaculture Research 36:113-119. (Winner of SEAFDEC
Elvira Tan award for best paper 2004-2005)
2005.
Basiao, Z.U., Eguia, R.V., and R.W. Doyle. Growth response of
Nile
tilapia fry to salinity stress in
the presence of an 'internal reference' fish. Aquaculture
Research 36, 712-720.
2005.
Moss, S.M., R.W. Doyle, and D.V. Lightner. Breeding shrimp for
disease resistance: challenges and opportunities for improvement. In: P.
Walker, R. Lester and M.G. Bondad-Reantaso (eds). Diseases in Asian
Aquaculture V, pp. 379-393. Fish Health Section, Asian Fisheries Society,
Manila
.
2003. Li, K., C.A. Field, and R.W. Doyle. Estimation of additive genetic
variance components in aquaculture populations selectively pedigreed by
DNA fingerprinting. Biometrical Journal 45:61-72.
2003. Doyle, R.W. Contribution of genetics to aquaculture: a socio-economic
critique. Fisheries Science
68,
Supplement I: 708-713.
2001. Doyle, R.W., R. Perez-Enriquez, M. Takagi, and N. Taniguchi.
Selective recovery of founder genetic diversity in aquaculture broodstocks
and captive, endangered fish populations. Genetica 111:
291-304.
2001. Doyle, R.W. Increasing genetic diversity in a hatchery without
bringing in new breeders. Hatchery International 2
(5):18-20.
2001. Ruzzante, D.E., C.T. Taggart, R.W. Doyle, and D. Cook. Stability
in the historical pattern of genetic structure of Newfoundland cod (Gadus
morhua) despite the catastrophic decline in population size from 1964
to 1994. Conservation Genetics 2 (3): 257-269.
2000. Ambali, A. J. D., R. W. Doyle, and D. I. Cook. Development of
polymorphic microsatellite DNA loci for characterising Oreochromis
shiranus subspecies in Malawi. Journal of Applied Ichthyology
16(3):121-125.
1999. Doyle, R. W. Managing broodstock for on-farm genetic improvement:
principles and examples. In Proceedings Simposio Centroamericano de
Acuacultura, edited by B. W. Green, H. C. Clifford, M. McNamara and G. M.
Moctezuma. San Pedro Sula, Honduras: World Aquaculture Society (C.R.S.P.).
pp. 155-162.
1999. Ambali, A. J. D., R. W. Doyle, and D. I Cook. Genetic changes in
Oreochromis shiranus (Trewavas) associated with the early stages of
national aquaculture development in Malawi. Aquaculture Research 30:
(579-588).
1999. Ambali, A.J., R. W. Doyle, and A. O. Maluwa. The potential of
small waterbodies as in situ gene banks for aquaculture: a genetic
assessment of the Malawian reservoirs. In Proceedings of the Committee for
Inland Fisheries for Africa (CIFA): FAO/Fishing News Book. in press.
1999. Basiao, Z. and R. W. Doyle. Test of size-specific mass selection
for tilapia cage farming in the Philippines. Aquaculture Research
30:373-378.
1999. Doyle, R. W., B. A. Costa-Pierce, and A. J. Ambali. Forensic
aquaculture, or, do you really expect us to believe these fish came from
Egypt? Aquaculture 173:7.
1999. Gadagkar, S. R., and R. W. Doyle. A genetic analysis of the
growth-behaviour feedback loop in Oreochromis niloticus using DNA
fingerprinting. Aquaculture 173:7.
1999. Herbinger, C. M., P. T. O'Reilly, R. W. Doyle, J. M. Wright, and
F. O'Flynn. Early Growth Performance of Atlantic salmon full-sib families
reared in single family tanks versus in mixed family tanks. Aquaculture
173:105-116.
1997. Costa-Pierce, B. A., and R. W. Doyle. Genetic identification and
status of California regional strains in southern California. In Tilapia
Aquaculture in the Americas; edited by B. A. Costa-Pierce and J. Rakocy.
Baton Rouge, Louisiana: World Aqua. Soc. Books. pp. 1-17.
1997. Takagi, M., Taniguchi, N., Cook, D., and R. W. Doyle. Isolation
and characterization of microsatelite loci from red sea bream Pagrus major
and detection in closely related species. Fisheries Science 63(2):199-204.
1996. Doyle, R. W., C. M. Herbinger, M. Ball, and G. A. E. Gall, eds.
Genetics in Aquaculture V. Amsterdam: Elsevier. 358 pp.
1995. Zhang, J, R W Doyle, X Sun, J Wang, Y Shi, Y Gong, and J Zhu.
Rapid response of Jian carp (Cyprinus carpio var. Jian) to on-farm
domestication selection in China. Aquaculture 137:277.
1995. Herbinger, C. M., R. W. Doyle, E. R. Pitman, D. Paquet, K. A.
Mesa, D. B. Morris, and D. Cook. DNA fingerprint analysis of paternal and
maternal effects on offspring growth and survival in communally-reared
rainbow trout. Aquaculture 137:245-256.
1995. Doyle, R.W., C. Herbinger, C.T. Taggart, and S. Lochmann. Use of
DNA microsatellite fingerprinting to analyse genetic correlations between
hatchery and natural fitness. In Uses and Effects of Cultured fishes in
Aquatic Ecosystems; edited by H. L. H. Schramm and R. G. Piper.
Albuquerque: American Fisheries Society. pp. 205-211.
1995. Doyle, R W, and C M Herbinger. Broodstock improvement strategies
based on DNA fingerprinting: examples and cost-benefit analysis.
Aquaculture 137:283.
1995. Brzeski, V. J. , and R. W. Doyle. A test of an on-farm selection
procedure for tilapia growth. Aquaculture 137:219-230.
1995. Uraiwan, S., Doyle, R. W., and R. Jala. Evidence of genotype
environment interaction observed in selected strains of tilapia (Oreochromis
niloticus Linn.) during on farm growth comparison. Aquaculture 137: 330.
1994. Ruzzante, D E, and R W Doyle. Evolution of social behaviour in a
resource-rich, structured environment. Evolution 47:456-470.
1994. Doyle, R.W., and C. M. Herbinger. The use of DNA fingerprinting
for high-intensity, within-family selection in fish breeding. Proceedings
5th World Congress, Genetics Applied to Livestock Production Guelph,
Ontario. Canada 19:364-371.
1994. Doyle, R. W., Z. Jiansen, S. Xiaoyi, W. Jianxin, and S. Yonghong.
Growth Comparison of different ages and generations of Jian carp (C.
carpio). Jour. Fish. Sci. China 1(1):20-24.
1993. Doyle, R W. The use of DNA fingerprint pedigrees for conserving
and increasing the productivity of locally adapted aquaculture breeds. In
Conservation and Utilization of Aquatic Genetic Resources: F.A.O.
Fisheries Report #491. pp. 42-51.
1992. Ruzzante, D E, and R W Doyle. Behaviour, growth and intensity of
social interaction among fish. Can. Jour. Statistics 20:222-227.
1991. Doyle, R W., N. L. Shackell, Z. Basiao, S. Uraiwan, T Matricia,
and A. J. Talbot. Selective diversification of aquaculture stocks: a
proposal for economically sustainable genetic conservation. Can. Jour.
Fish. Aquat. Sci. 48 (Suppl. 1):148-154.
1991. Shackell, N, and R W Doyle. Scale morphology as an index of
developmental stability and stress resistance of tilapia (O. niloticus).
Can. Jour. Fish. Aquat. Sci. 48:1662-1669.
1991. Harris, A S, S Bieger, R W Doyle, and J M Wright. DNA
fingerprinting of tilapia Oreochromis niloticus and its application to
aquaculture genetics. Aquaculture 92:57-163.
1991. Ruzzante, D E, and R W Doyle. Behavioural and growth responses to
the intensity of intraspecific social interaction among medaka (Oryzias
latipes). (Pices: Cyprinodontidae.). J. Fish Biol. 37:663-673.
1991. Ruzzante, D E, and R W Doyle. Rapid behavioral changes in medaka
(Oryzias latipes) caused by selection for competitive and non-competitive
growth. Evolution 45:1936-1946.
1990. Doyle, R W, C A Field, and Z U Basiao. Statistical procedures for
using reference fish for comparing the growth of different genetic strains
in aquaculture. Proceedings 2nd. Asian Fisheries Forum. 499-502 pp.
1990. Basiao, Z U, and R W Doyle. Interaction between test and
reference populations when tilapia strains are compared by the
"internal control" technique. Aquaculture 85:207-214.
1990. Eknath, A E, and R W Doyle. Effective population size and rate of
inbreeding in aquaculture of Indian major carps. Aquaculture 85:293-305.
1990. Eknath, A E, and R W Doyle. Repeatability of relative size of
individuals under communal stocking: implications for size-grading in
aquaculture. Paper read at Proceedings 2nd. Asian Fisheries Forum. 45-48
pp.
1990. Robinson, B W, and R W Doyle. Phenotypic correlations among
behaviour and growth variables in tilapia: implications for domestication
selection. Aquaculture 85:177-186.
1990. Shackell, N, and R W Doyle. 1990. The coordination of growth in
juvenile tilapia (Oreochromis mossambicus/hornorum). Proceedings 2nd.
Asian Fisheries Forum. Manila. p. 495-498.
1990. Sinervo, B, and R W Doyle. Life-history analysis in
"physiological" compared with sidereal time: an example with an
amphipod (Gammarus lawrencianus) in a varying environment. Mar. Biol.
107:129-139.
1990. Basiao, Z., and R. W. Doyle. Use of internal reference population
for growth rate comparison of tilapia strains. I. Crowded environments. In
Proceedings 2nd. Asian Fisheries Forum. Manila: Asian Fisheries Society.
pp. 503-506.
